installation error #89
Comments
|
The error is because cuda 11 no longer supports sm30 as target architecture. I think you can fix easily, by changing |
Thank you! This works. But currently I encountered another problem. 2020-12-09 18:44:45.561461: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0 /usr/lib/python3/dist-packages/tensorflow/include/tensorflow/core/platform/env.h(368): warning: overloaded virtual function "tensorflow::Env::RegisterFileSystem" is only partially overridden in class "tensorflow::EnvWrapper" /usr/lib/python3/dist-packages/tensorflow/include/absl/types/optional.h(428): warning: expression has no effect /usr/lib/python3/dist-packages/tensorflow/include/absl/types/optional.h(428): warning: expression has no effect /usr/include/c++/9/utility(310): error: identifier "__integer_pack" is undefined /usr/include/c++/9/utility(310): error: expected a ">" /usr/include/c++/9/thread(251): error: no instance of function template "std::thread::_Invoker<_Tuple>::_M_invoke [with _Tuple=std::tuple<std::function<void ()>>]" matches the argument list 4 errors detected in the compilation of "/home/wanglab-robot/hand-imitation-learning/honnotate/dirt/csrc/rasterise_egl.cu". |
My setting is Ubuntu16.04, cuda10.0, python3.6.12, tensorflow-gpu==1.15.0
when I was trying to use pip install . for installation, the errors are:
Defaulting to user installation because normal site-packages is not writeable
Processing /home/wanglab-robot/hand-imitation-learning/honnotate/dirt
Requirement already satisfied: numpy in /usr/lib/python3/dist-packages (from dirt==0.3.0) (1.17.4)
Requirement already satisfied: tensorflow-gpu>=1.6 in /usr/lib/python3/dist-packages (from dirt==0.3.0) (2.3.1)
Building wheels for collected packages: dirt
Building wheel for dirt (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-d_sudtpa/setup.py'"'"'; file='"'"'/tmp/pip-req-build-d_sudtpa/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /tmp/pip-wheel-hiuwgeb0
cwd: /tmp/pip-req-build-d_sudtpa/
Complete output (77 lines):
running bdist_wheel
running build
-- The CXX compiler identification is GNU 7.5.0
-- The CUDA compiler identification is NVIDIA 11.1.74
-- Check for working CXX compiler: /usr/local/bin/g++
-- Check for working CXX compiler: /usr/local/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working CUDA compiler: /usr/bin/nvcc
-- Check for working CUDA compiler: /usr/bin/nvcc -- works
-- Detecting CUDA compiler ABI info
-- Detecting CUDA compiler ABI info - done
-- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so found components: OpenGL EGL
2020-12-09 15:36:50.425886: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:36:50.504972: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key2020-12-09 15:36:52.873859: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:36:52.876610: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key2020-12-09 15:36:54.366776: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:36:54.369497: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pip-req-build-d_sudtpa/build
Scanning dependencies of target rasterise
[ 33%] Building CUDA object CMakeFiles/rasterise.dir/rasterise_egl.cu.o
[ 33%] Building CUDA object CMakeFiles/rasterise.dir/rasterise_grad_egl.cu.o
[ 66%] Building CXX object CMakeFiles/rasterise.dir/rasterise_grad_egl.cpp.o
[ 66%] Building CXX object CMakeFiles/rasterise.dir/rasterise_egl.cpp.o
nvcc fatal : Value 'sm_30' is not defined for option 'gpu-architecture'
make[2]: *** [CMakeFiles/rasterise.dir/build.make:76: CMakeFiles/rasterise.dir/rasterise_egl.cu.o] Error 1
make[2]: *** Waiting for unfinished jobs....
nvcc fatal : Value 'sm_30' is not defined for option 'gpu-architecture'
make[2]: *** [CMakeFiles/rasterise.dir/build.make:102: CMakeFiles/rasterise.dir/rasterise_grad_egl.cu.o] Error 1
In file included from /tmp/pip-req-build-d_sudtpa/csrc/rasterise_grad_egl.cpp:22:0:
/usr/lib/python3/dist-packages/tensorflow/include/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceCuda.h:3:2: warning: #warning "Deprecated header file, please either include the main Eigen/CXX11/Tensor header or the respective TensorDeviceGpu.h file" [-Wcpp]
#warning "Deprecated header file, please either include the main Eigen/CXX11/Tensor header or the respective TensorDeviceGpu.h file"
^~~~~~~
In file included from /tmp/pip-req-build-d_sudtpa/csrc/rasterise_egl.cpp:24:0:
/usr/lib/python3/dist-packages/tensorflow/include/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceCuda.h:3:2: warning: #warning "Deprecated header file, please either include the main Eigen/CXX11/Tensor header or the respective TensorDeviceGpu.h file" [-Wcpp]
#warning "Deprecated header file, please either include the main Eigen/CXX11/Tensor header or the respective TensorDeviceGpu.h file"
^~~~~~~
/tmp/pip-req-build-d_sudtpa/csrc/rasterise_grad_egl.cpp: In lambda function:
/tmp/pip-req-build-d_sudtpa/csrc/rasterise_grad_egl.cpp:49:90: warning: ignoring return value of ‘tensorflow::Status tensorflow::shape_inference::InferenceContext::ReplaceDim(tensorflow::shape_inference::ShapeHandle, tensorflow::int64, tensorflow::shape_inference::DimensionHandle, tensorflow::shape_inference::ShapeHandle*)’, declared with attribute warn_unused_result [-Wunused-result]
c->ReplaceDim(c->input(0), 2, c->Dim(c->input(2), 3), &grad_vertex_colours_shape); // i.e. vertex-colors has same shape as vertices, but with final dimension replaced by channel count
^
In file included from /tmp/pip-req-build-d_sudtpa/csrc/rasterise_grad_egl.cpp:13:0:
/usr/lib/python3/dist-packages/tensorflow/include/tensorflow/core/framework/shape_inference.h:418:10: note: declared here
Status ReplaceDim(ShapeHandle s, int64 dim_index, DimensionHandle new_dim,
^~~~~~~~~~
make[1]: *** [CMakeFiles/Makefile2:76: CMakeFiles/rasterise.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
Traceback (most recent call last):
File "", line 1, in
File "/tmp/pip-req-build-d_sudtpa/setup.py", line 27, in
setup(
File "/usr/lib/python3/dist-packages/setuptools/init.py", line 144, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.8/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.8/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.8/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/wheel/bdist_wheel.py", line 223, in run
self.run_command('build')
File "/usr/lib/python3.8/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.8/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/tmp/pip-req-build-d_sudtpa/setup.py", line 24, in run
build_csrc()
File "/tmp/pip-req-build-d_sudtpa/setup.py", line 20, in build_csrc
subprocess.check_call(['make', '-j{}'.format(build_cpus)], cwd=build_path)
File "/usr/lib/python3.8/subprocess.py", line 364, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['make', '-j4']' returned non-zero exit status 2.
ERROR: Failed building wheel for dirt
Running setup.py clean for dirt
Failed to build dirt
Installing collected packages: dirt
Running setup.py install for dirt ... error
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-d_sudtpa/setup.py'"'"'; file='"'"'/tmp/pip-req-build-d_sudtpa/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-uz8n7g16/install-record.txt --single-version-externally-managed --user --prefix= --compile --install-headers /home/wanglab-robot/.local/include/python3.8/dirt
cwd: /tmp/pip-req-build-d_sudtpa/
Complete output (48 lines):
running install
running build
2020-12-09 15:36:59.704452: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:36:59.707960: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key2020-12-09 15:37:01.202660: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:37:01.205204: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key2020-12-09 15:37:02.669757: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:37:02.672508: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key-- Configuring done
-- Generating done
-- Build files have been written to: /tmp/pip-req-build-d_sudtpa/build
[ 16%] Building CUDA object CMakeFiles/rasterise.dir/rasterise_egl.cu.o
[ 33%] Building CXX object CMakeFiles/rasterise.dir/shaders.cpp.o
[ 50%] Building CUDA object CMakeFiles/rasterise.dir/rasterise_grad_egl.cu.o
nvcc fatal : Value 'sm_30' is not defined for option 'gpu-architecture'
make[2]: *** [CMakeFiles/rasterise.dir/build.make:76: CMakeFiles/rasterise.dir/rasterise_egl.cu.o] Error 1
make[2]: *** Waiting for unfinished jobs....
nvcc fatal : Value 'sm_30' is not defined for option 'gpu-architecture'
make[2]: *** [CMakeFiles/rasterise.dir/build.make:102: CMakeFiles/rasterise.dir/rasterise_grad_egl.cu.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:76: CMakeFiles/rasterise.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
Traceback (most recent call last):
File "", line 1, in
File "/tmp/pip-req-build-d_sudtpa/setup.py", line 27, in
setup(
File "/usr/lib/python3/dist-packages/setuptools/init.py", line 144, in setup
return distutils.core.setup(**attrs)
File "/usr/lib/python3.8/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib/python3.8/distutils/dist.py", line 966, in run_commands
self.run_command(cmd)
File "/usr/lib/python3.8/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/usr/lib/python3/dist-packages/setuptools/command/install.py", line 61, in run
return orig.install.run(self)
File "/usr/lib/python3.8/distutils/command/install.py", line 589, in run
self.run_command('build')
File "/usr/lib/python3.8/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib/python3.8/distutils/dist.py", line 985, in run_command
cmd_obj.run()
File "/tmp/pip-req-build-d_sudtpa/setup.py", line 24, in run
build_csrc()
File "/tmp/pip-req-build-d_sudtpa/setup.py", line 20, in build_csrc
subprocess.check_call(['make', '-j{}'.format(build_cpus)], cwd=build_path)
File "/usr/lib/python3.8/subprocess.py", line 364, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['make', '-j4']' returned non-zero exit status 2.
----------------------------------------
ERROR: Command errored out with exit status 1: /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-req-build-d_sudtpa/setup.py'"'"'; file='"'"'/tmp/pip-req-build-d_sudtpa/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /tmp/pip-record-uz8n7g16/install-record.txt --single-version-externally-managed --user --prefix= --compile --install-headers /home/wanglab-robot/.local/include/python3.8/dirt Check the logs for full command output.
When I install in the development mode, the error is:
cmake ../csrc
-- The CXX compiler identification is GNU 7.5.0
-- The CUDA compiler identification is NVIDIA 11.1.74
-- Check for working CXX compiler: /usr/local/bin/g++
-- Check for working CXX compiler: /usr/local/bin/g++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Check for working CUDA compiler: /usr/bin/nvcc
-- Check for working CUDA compiler: /usr/bin/nvcc -- works
-- Detecting CUDA compiler ABI info
-- Detecting CUDA compiler ABI info - done
-- Found OpenGL: /usr/lib/x86_64-linux-gnu/libOpenGL.so found components: OpenGL EGL
2020-12-09 15:37:38.026647: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:37:38.029756: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key2020-12-09 15:37:39.524808: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:37:39.527481: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key2020-12-09 15:37:41.007646: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
2020-12-09 15:37:41.010399: I tensorflow/stream_executor/platform/default/dso_loader.cc:49] Successfully opened dynamic library libcudart.so.11.0
Invalid MIT-MAGIC-COOKIE-1 key-- Configuring done
-- Generating done
-- Build files have been written to: /home/wanglab-robot/hand-imitation-learning/honnotate/dirt/build
wanglab-robot@lambda-dual:~/hand-imitation-learning/honnotate/dirt/build$ make
Scanning dependencies of target rasterise
[ 16%] Building CXX object CMakeFiles/rasterise.dir/rasterise_egl.cpp.o
In file included from /home/wanglab-robot/hand-imitation-learning/honnotate/dirt/csrc/rasterise_egl.cpp:24:0:
/usr/lib/python3/dist-packages/tensorflow/include/unsupported/Eigen/CXX11/src/Tensor/TensorDeviceCuda.h:3:2: warning: #warning "Deprecated header file, please either include the main Eigen/CXX11/Tensor header or the respective TensorDeviceGpu.h file" [-Wcpp]
#warning "Deprecated header file, please either include the main Eigen/CXX11/Tensor header or the respective TensorDeviceGpu.h file"
^~~~~~~
[ 33%] Building CUDA object CMakeFiles/rasterise.dir/rasterise_egl.cu.o
nvcc fatal : Value 'sm_30' is not defined for option 'gpu-architecture'
make[2]: *** [CMakeFiles/rasterise.dir/build.make:76: CMakeFiles/rasterise.dir/rasterise_egl.cu.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:76: CMakeFiles/rasterise.dir/all] Error 2
make: *** [Makefile:84: all] Error 2
The text was updated successfully, but these errors were encountered: