Wikidata:WikiProject Wikidata for research/Meetups/2018-06-17-19-Berlin
Jump to navigation
Jump to search
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/b/b2/Gene_Wiki_-_Expanding_the_ecosystem_of_community_intelligence_resources_%28R01_GM089820%29.pdf/page1-220px-Gene_Wiki_-_Expanding_the_ecosystem_of_community_intelligence_resources_%28R01_GM089820%29.pdf.jpg)
Copy of a grant proposal that resulted in a funded project.
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/6/62/Ojai%2C_Calif._%28March_18%2C_2017%29_%E2%80%93_Jan_Hamber%2C_longtime_condor_advocate_and_conservationist%2C_with_her_Trailblazing_Women_in_Science_award_from_the_U.S._Fish_and_Wildlife_Service._%2832715168954%29.jpg/220px-thumbnail.jpg)
An award winner presenting their award
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/7/71/Wikibase_instances_indexed_in_the_registry_as_of_April_2018_-_screenshot_2018-04-30_17.10.42.png/220px-Wikibase_instances_indexed_in_the_registry_as_of_April_2018_-_screenshot_2018-04-30_17.10.42.png)
Wikibase instances
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/e/e5/Modeling-software-file.pdf/page1-220px-Modeling-software-file.pdf.jpg)
Modeling Software and File Formats: ShEx for data models, Katherine Thornton
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/b/b2/Gene_Wiki_-_Expanding_the_ecosystem_of_community_intelligence_resources_%28R01_GM089820%29.pdf/page1-220px-Gene_Wiki_-_Expanding_the_ecosystem_of_community_intelligence_resources_%28R01_GM089820%29.pdf.jpg)
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/6/62/Ojai%2C_Calif._%28March_18%2C_2017%29_%E2%80%93_Jan_Hamber%2C_longtime_condor_advocate_and_conservationist%2C_with_her_Trailblazing_Women_in_Science_award_from_the_U.S._Fish_and_Wildlife_Service._%2832715168954%29.jpg/220px-thumbnail.jpg)
![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/7/71/Wikibase_instances_indexed_in_the_registry_as_of_April_2018_-_screenshot_2018-04-30_17.10.42.png/220px-Wikibase_instances_indexed_in_the_registry_as_of_April_2018_-_screenshot_2018-04-30_17.10.42.png)
Online coverage
[edit]- Wikibase Workshop in Berlin
- The EU NanoSafety Cluster as Linked Data visualized with Scholia in the EU NanoSafety Cluster Newsletter
- Converting any SPARQL endpoint to an OpenAPI, blog post about using grlc to convert the WDQS to an OpenAPI service
About
[edit]- In collaboration with the European Research Council (Q1377836), Gene Wiki (Q5531528), Rhizome (Q7320757), WikiCite (Q30035267), Wikibase Community User Group (Q51033881) and others, we are meeting in Berlin (Q64) to model and load grants and related data into Wikidata and possibly some dedicated Wikibase(s).
- The workshop is part of a series of Workshops. It will build on the progress made in Antwerp (Q12892) at the April 2018 workshop
Venue
[edit]Hotels
[edit]Sessions
[edit]There will be themes:
- Infrastructure
- Data modelling for grants/grant-related data
- Write bots to populate Wikidata and Wikibase
Program
[edit]- Another version - highlighting different points - is here
Sunday June 17th (Introductions & setting the scene)
[edit]- 13:00-18:00
Talks
[edit]- Modeling
- Working towards a Grant linked landscape (Diego)
- "Federate is RDF spelled backwards" or how different views on federation exist (Andra/ Lydia?)
- Modelling linked data with Shape Expressions (Eric)
- Modelling linked data FAIR (Mark)
- Using a Wikibase as a FAIR data point (FDP) (Mark)
- Infrastructure
- Launching Wikibase from a Website (Raz)
- Wikibase registry (Adam/ Daniel)
- Scholia as an interface to grant information (Finn) [1]
- An introduction to OpenAIRE and its API (Najko Jahn)
- Loading of data
- Loading data with Wikidata integrator (Greg)
- Loading data with OpenRefine (Antonin)
Monday June 18th (hands on & getting things done)
[edit]- 9:00-18:00
Talks
[edit]![](http://178.128.105.246/cars-http-upload.wikimedia.org/wikipedia/commons/thumb/e/e5/Modeling-software-file.pdf/page1-220px-Modeling-software-file.pdf.jpg)
- Driving cases
- Introducing the Zika corpus (Daniel)
- Zika in OpenAIRE
- Zika in NIH RePORT
- Notice of NIAID's Interest to Highlight High-Priority Zika virus (ZIKV) Research Areas http://grants.nih.gov/grants/guide/notice-files/NOT-AI-16-026.html
- Zika papers acknowledging NIAID funding
- List of Zika-related projects co-funded by the MRC, the Newton Fund and the Wellcome Trust (as of March 21, 2016)
- List of Zika-related projects funded by the Brazilian Ministry of Health
- Seventeen new research proposals aimed at identifying solutions to address the Zika virus
- Introducing WikiPathways and the EU NanoSafety Cluster (Egon)
- Introducing Gene Wiki (Andra/ Greg)
- Modelling software and file formats (Kat)
- Introducing the Zika corpus (Daniel)
Reviewing and extending proposed models
[edit]As a preparation we have created a set of schemas for grant related data in Wikidata. During this session we will review these and where necessary adapt and extend them.
Working Groups
[edit]Infrastructure
[edit]Infrastructure Working Group Etherpad
Feeding Wikidata and a Wikibase where necessary with public data on grants
[edit]During this session both the Wikidata integrator and Open Refine will be used to populate both Wikidata and Wikibase with data. There is a collection of grant data is available.
Tuesday June 19th (Documentation, wrapping up and future steps)
[edit]- 9:00-16:00
Notes
[edit]Schema proposals
[edit]- Modeling Group
- Data Integration Extension for Grants Ontology (DIEGO)
- DIEGO Funders empower bureaucrats, who provide money, in partial payments, to projects, which have participants, to attain given goals, possibly in collaboration with other projects.
- Summary of work activites
- ShEx schemas for DIEGO model
- This group started from the schemas that Diego and Andra prepared: https://github.com/shexSpec/schemas/tree/master/Wikidata/research_funding .
- We extended these schemas and were able to successfully validate entity data for https://www.wikidata.org/wiki/Q54875058 (https://www.wikidata.org/wiki/Special:EntityData/Q54875058.ttl) .
- We used Eric Prud'hommeaux's Shex Simple Online Validator: https://rawgit.com/shexSpec/shex.js/wikidata/doc/shex-simple.html?# to perform the validation.
- DanBri worked on the DIEGO model for schema.org:
- ShEx schemas for DIEGO model
- Data Integration Extension for Grants Ontology (DIEGO)
Participants
[edit]- Andra Waagmeester (talk) 21:02, 26 April 2018 (UTC) Scholia
- Dragan Espenschied (talk) 20:01, 17 June 2018 (UTC)
- Daniel Mietchen (talk) 01:46, 27 April 2018 (UTC) Scholia
- Egon Willighagen (talk) 06:35, 28 April 2018 (UTC) (I will arrive on Saturday and leave on Wednesday) Scholia
- Katherine Thornton (talk) 16:05, 30 April 2018 (UTC)
- Eric Prud'hommeaux (talk) 07:07, 16 May 2018 (UTC)
- Finn Årup Nielsen (fnielsen) (talk) Scholia
- Antonin Delpeuch − Pintoch (talk) 14:11, 18 May 2018 (UTC)
- Gstupp (talk) 16:40, 18 May 2018 (UTC)
- Alexis-Michel Mugabushaka
- Tom Baker
- Diego Chialva
- Najko Jahn
- T Arrow (talk) 09:06, 4 June 2018 (UTC)
- Jens Ohlig (WMDE) (talk) 09:56, 11 June 2018 (UTC)
- Lucas Werkmeister (WMDE) (talk)
- Lydia Pintscher (WMDE) (talk) 18:19, 11 June 2018 (UTC)
- Petermr (talk) 12:29, 15 June 2018 (UTC) Scholia
- Dan Brickley (talk)
- Joachim Neubert (talk) 12:48, 15 June 2018 (UTC)
See also
[edit]- Example grants
- Research prizes